Information for motif10


Reverse Opposite:

p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.814
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif133.3
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets501.6 +/- 514.7bp
Average Position of motif in Background589.7 +/- 505.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0498.1_Meis1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCCGTCAGTC----
AGCTGTCACTCACCT

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCCGTCAGTC--
NCTGTCAATCAN

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCGTCAGTC-
GSCTGTCACTCA

POL002.1_INR/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCCGTCAGTC--
----TCAGTCTT

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCGTCAGTC
-ACGTCA---

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCCGTCAGTC
NTTATTCGTCATNC

MA0117.1_Mafb/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCGTCAGTC
-NCGTCAGC-

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCCGTCAGTC----
TCACCCATCAATAAACA

MA0067.1_Pax2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCCGTCAGTC
--AGTCACGC

MA0070.1_PBX1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCGTCAGTC---
-CCATCAATCAAA