Information for motif13


Reverse Opposite:

p-value:1e-9
log p-value:-2.084e+01
Information Content per bp:1.472
Number of Target Sequences with motif125.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif273.0
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets413.1 +/- 368.9bp
Average Position of motif in Background519.3 +/- 504.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAGTCTA
CSTGGGAAAD--

PB0201.1_Zfp281_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGAGTCTA--
NNNATTGGGGGTNTCCT

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGGGAGTCTA---
NTNNNAGGAGTCTCNTN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGAGTCTA
RGSMTBCTGGGAAAT--

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGGGAGTCTA---
NNATTGGACTTTNGNN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGGGAGTCTA
TGGGGA-----

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAGTCTA
CTTGAGTGGCT-

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TGGGAGTCTA---
-AGGTCTCTAACC

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----TGGGAGTCTA--
NTNTGGGGGGTCNNNA

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----TGGGAGTCTA
NGCGTGGGCGGR--