Information for motif14


Reverse Opposite:

p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.731
Number of Target Sequences with motif272.0
Percentage of Target Sequences with motif6.07%
Number of Background Sequences with motif732.4
Percentage of Background Sequences with motif4.16%
Average Position of motif in Targets427.9 +/- 439.1bp
Average Position of motif in Background534.2 +/- 473.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TACTCGGTTGGC-----
-NGTAGGTTGGCATNNN

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.63
Offset:7
Orientation:forward strand
Alignment:TACTCGGTTGGC-
-------TTGGCA

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TACTCGGTTGGC
----GTGTTGN-

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TACTCGGTTGGC
TACTNNNN----

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TACTCGGTTGGC
AGTATTCTCGGTTGC-

MA0461.1_Atoh1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TACTCGGTTGGC
----CAGATGGC

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TACTCGGTTGGC--
------CTTGGCAA

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TACTCGGTTGGC---
TATTATGGGATGGATAA

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------TACTCGGTTGGC
TTCNAAGTACTTNNNNN--

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TACTCGGTTGGC
-TGTCGGTT---