Information for motif18


Reverse Opposite:

p-value:1e-8
log p-value:-1.871e+01
Information Content per bp:1.592
Number of Target Sequences with motif642.0
Percentage of Target Sequences with motif14.33%
Number of Background Sequences with motif2032.1
Percentage of Background Sequences with motif11.53%
Average Position of motif in Targets497.1 +/- 436.6bp
Average Position of motif in Background516.4 +/- 457.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GCCTGVGCRA
GCGCCTGCGCA-

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGVGCRA
GCGCATGCGCAG

NRF1/Promoter/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGVGCRA
GCGCATGCGCAC

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCCTGVGCRA-
-GTTGCGCAAT

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGVGCRA-
NNGCNCTGCGCGGC

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCTGVGCRA-
NGCGTGGGCGGR

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCTGVGCRA---
GGGCCGTGTGCAAAAA

POL002.1_INR/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGVGCRA
NNNANTGA----

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCCTGVGCRA
-GCTGTG---

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCTGVGCRA
NNCACCTGNN---