Information for motif20


Reverse Opposite:

p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.590
Number of Target Sequences with motif660.0
Percentage of Target Sequences with motif14.73%
Number of Background Sequences with motif2119.8
Percentage of Background Sequences with motif12.03%
Average Position of motif in Targets485.2 +/- 492.7bp
Average Position of motif in Background500.7 +/- 460.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACCCAGGAGTTC
--NCTGGAATGC

MA0156.1_FEV/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACCCAGGAGTTC
---CAGGAAAT-

MA0116.1_Zfp423/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACCCAGGAGTTC
GGCACCCAGGGGTGC

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACCCAGGAGTTC
-ANCAGGATGT-

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACCCAGGAGTTC
-NNCAGGTGNN-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACCCAGGAGTTC
--CCWGGAATGY

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACCCAGGAGTTC
ATTTCCCAGVAKSCY

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACCCAGGAGTTC
-NACAGGAAAT-

MA0154.2_EBF1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACCCAGGAGTTC
TCCCTGGGGAN-

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACCCAGGAGTTC
-CACAGN-----