| p-value: | 1e-7 |
| log p-value: | -1.626e+01 |
| Information Content per bp: | 1.620 |
| Number of Target Sequences with motif | 150.0 |
| Percentage of Target Sequences with motif | 3.35% |
| Number of Background Sequences with motif | 374.6 |
| Percentage of Background Sequences with motif | 2.13% |
| Average Position of motif in Targets | 377.3 +/- 399.7bp |
| Average Position of motif in Background | 555.6 +/- 492.0bp |
| Strand Bias (log2 ratio + to - strand density) | -0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.03 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 1 |
| Score: | 0.71
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | TTCTGGCAGA
-CTTGGCAA- |
|
|
|
MA0092.1_Hand1::Tcfe2a/Jaspar
| Match Rank: | 2 |
| Score: | 0.70
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TTCTGGCAGA
GGTCTGGCAT- |
|
|
|
MA0161.1_NFIC/Jaspar
| Match Rank: | 3 |
| Score: | 0.69
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | TTCTGGCAGA
--TTGGCA-- |
|
|
|
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 4 |
| Score: | 0.65
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTCTGGCAGA-
TGTCTGDCACCT |
|
|
|
MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
| Match Rank: | 5 |
| Score: | 0.62
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TTCTGGCAGA-
CTGTCTGTCACCT |
|
|
|
MA0597.1_THAP1/Jaspar
| Match Rank: | 6 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTCTGGCAGA
TNNGGGCAG- |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 7 |
| Score: | 0.58
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TTCTGGCAGA
VBSYGTCTGG---- |
|
|
|
PB0195.1_Zbtb3_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTCTGGCAGA-----
NNNNTGCCAGTGATTG |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 9 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TTCTGGCAGA
CTGTCTGG---- |
|
|
|
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | TTCTGGCAGA------
--CTGGCAGNCTGCCA |
|
|
|
