Information for motif26


Reverse Opposite:

p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.823
Number of Target Sequences with motif165.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif425.4
Percentage of Background Sequences with motif2.41%
Average Position of motif in Targets516.3 +/- 490.7bp
Average Position of motif in Background563.0 +/- 483.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0131.1_HINFP/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GCGGAGGTTR
GCGGACGTTN

PB0058.1_Sfpi1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCGGAGGTTR
TTAAGAGGAAGTTA

PB0011.1_Ehf_1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGGTTR
AGGACCCGGAAGTAA

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCGGAGGTTR----
TCGCGAAGGTTGTACT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCGGAGGTTR
--GGCVGTTR

ETS(ETS)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCGGAGGTTR
AACCGGAAGT--

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCGGAGGTTR
ANCCGGAAGT--

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGGAGGTTR
ACVAGGAAGT--

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGGAGGTTR
GTGGAT----

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCGGAGGTTR---
NNATTGGACTTTNGNN