Information for motif29


Reverse Opposite:

p-value:1e-5
log p-value:-1.331e+01
Information Content per bp:1.682
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif256.5
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets561.9 +/- 521.0bp
Average Position of motif in Background538.6 +/- 522.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTGSMGYGAT
ATGGGGTGAT

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTGSMGYGAT--
GTGGCGTGACNG

MA0595.1_SREBF1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTGSMGYGAT
GTGGGGTGAT

MA0596.1_SREBF2/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTGSMGYGAT
ATGGGGTGAT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTGSMGYGAT--
--GCAGTGATTT

MA0483.1_Gfi1b/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGSMGYGAT--
-TGCTGTGATTT

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGSMGYGAT---
-TGGCGGGAAAHB

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTGSMGYGAT
--GGCGCGCT

MA0067.1_Pax2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGSMGYGAT-
---NCGTGACN

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTGSMGYGAT---
NNNNTTGGCGCCGANNN