Information for motif3


Reverse Opposite:

p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.880
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif15.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets464.8 +/- 435.5bp
Average Position of motif in Background474.9 +/- 372.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATAAGTCGGG
GATGAGTCAT-

MA0462.1_BATF::JUN/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATAAGTCGGG
GAAATGACTCA--

MA0476.1_FOS/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATAAGTCGGG
NATGAGTCANN

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATAAGTCGGG
DATGASTCAT-

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATAAGTCGGG
AATAATT----

MA0594.1_Hoxa9/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATAAGTCGGG
GCCATAAATCA--

MA0478.1_FOSL2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATAAGTCGGG
GGATGACTCAT-

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATAAGTCGGG-----
NNNNATGCGGGTNNNN

MA0099.2_JUN::FOS/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATAAGTCGGG
-TGAGTCA--

MA0490.1_JUNB/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATAAGTCGGG
GGATGACTCAT-