Information for motif31


Reverse Opposite:

p-value:1e-4
log p-value:-1.049e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets289.3 +/- 203.4bp
Average Position of motif in Background609.0 +/- 399.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AGATCCACAA
--ATCCAC--

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGATCCACAA-
SSAATCCACANN

MA0479.1_FOXH1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGATCCACAA
TCCAATCCACA-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGATCCACAA-
-AAACCACANN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGATCCACAA--
NWAACCACADNN

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGATCCACAA--
-AAACCACAGAN

MA0511.1_RUNX2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGATCCACAA-----
CAAACCACAAACCCC

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGATCCACAA-
-AAACCACAGC

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGATCCACAA
NAAACCACAG

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGATCCACAA
DGATCRATAN