Information for motif33


Reverse Opposite:

p-value:1e-3
log p-value:-9.207e+00
Information Content per bp:1.756
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets434.8 +/- 334.9bp
Average Position of motif in Background389.1 +/- 156.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTGGTTCGTTG
GTTTGTT-----

MA0502.1_NFYB/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGTTCGTTG
CTGATTGGTCNATTT

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGTTCGTTG
GTGTTGN-------

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTTGGTTCGTTG-
NNNNGTTGATTGGGTCG

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGTTCGTTG
CAGCTGTTTCCT--

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GTTGGTTCGTTG
CACGGCAGTTGGTNN----

MA0073.1_RREB1/Jaspar

Match Rank:7
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------GTTGGTTCGTTG
NGGGGGGGGGTGGTTTGGGG

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGTTCGTTG
TGATTGGCTANN--

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTTGGTTCGTTG
TGTCGGTT-----

MA0041.1_Foxd3/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GTTGGTTCGTTG
GAATGTTTGTTT----