Information for motif38


Reverse Opposite:

p-value:1e-3
log p-value:-7.118e+00
Information Content per bp:1.530
Number of Target Sequences with motif471.0
Percentage of Target Sequences with motif10.51%
Number of Background Sequences with motif1607.2
Percentage of Background Sequences with motif9.12%
Average Position of motif in Targets479.0 +/- 445.1bp
Average Position of motif in Background477.5 +/- 455.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0497.1_MEF2C/Jaspar

Match Rank:1
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------AAAATACA-
ATGCTAAAAATAGAA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAAATACA
DCYAAAAATAGM

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAAATACA
CCAAAAATAG-

MA0052.2_MEF2A/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AAAATACA--
AGCTAAAAATAGCAT

POL007.1_BREd/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAAATACA
NANANAC-

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAAATACA---
GAAAAAATTGCAAGG

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAATACA------
CATACAATACGAAATAA

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AAAATACA--
AGCCGAAAAAAAAAT

MA0033.1_FOXL1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAAATACA
TATACATA--

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAAATACA----
GGCAAAAGTCCAATAA