Information for motif43


Reverse Opposite:

p-value:1e-1
log p-value:-2.378e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets516.3 +/- 337.5bp
Average Position of motif in Background419.3 +/- 490.0bp
Strand Bias (log2 ratio + to - strand density)4.0
Multiplicity (# of sites on avg that occur together)8.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0075.1_Prrx2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTAATTCAGGCA
-TAATT------

PH0055.1_Hoxa7_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTAATTCAGGCA-
GTAGTAATTAATGGAA

PH0159.1_Rhox6/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTAATTCAGGCA
NNGCATTAATTAANGCA

PH0175.1_Vax2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GTAATTCAGGCA
GTGCACTAATTAAGAC-

PH0062.1_Hoxb7/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTAATTCAGGCA-
GTAGTAATTAATGCAA

PH0090.1_Lbx2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GTAATTCAGGCA
TNNNATTAATTAANNCA

PH0029.1_En2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GTAATTCAGGCA
NTNCACTAATTAGNGCA

PH0079.1_Hoxd3/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTAATTCAGGCA-
ANGNTAATTANCNCAN

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTAATTCAGGCA-
NNTAATCCNGNCNN

MA0132.1_Pdx1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTAATTCAGGCA
CTAATT------