Information for motif5


Reverse Opposite:

p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.725
Number of Target Sequences with motif636.0
Percentage of Target Sequences with motif14.20%
Number of Background Sequences with motif1951.2
Percentage of Background Sequences with motif11.07%
Average Position of motif in Targets478.5 +/- 464.6bp
Average Position of motif in Background498.0 +/- 464.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCACCGCACTC--
AATCGCACTGCATTCCG

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCACCGCACTC
ATCCAC-------

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCACCGCACTC
TCCGCCCCCGCATT-

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GCCACCGCACTC
CATAAGACCACCATTAC-

MA0511.1_RUNX2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCACCGCACTC
CAAACCACAAACCCC

MA0162.2_EGR1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCACCGCACTC---
-CCCCCGCCCCCGCC

MA0002.2_RUNX1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCGCACTC
AAACCACAGAN---

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCGCACTC
AAACCACAGC----

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCGCACTC
ACTATGCCAACCTACC-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCACCGCACTC
NWAACCACADNN---