Information for motif6


Reverse Opposite:

p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.655
Number of Target Sequences with motif946.0
Percentage of Target Sequences with motif21.12%
Number of Background Sequences with motif3076.8
Percentage of Background Sequences with motif17.46%
Average Position of motif in Targets470.4 +/- 445.5bp
Average Position of motif in Background523.0 +/- 482.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0009.1_T/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTCCCACCTA-
TTCACACCTAG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTCCCACCTA
-TGACACCT-

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCACCTA
KTTCACACCT-

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTCCCACCTA--
--NNCACCTGNN

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCACCTA---
NNAGTCCCACTCNNNN

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTCCCACCTA---
NNTTTTCACACCTTNNN

MA0471.1_E2F6/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCACCTA
NCTTCCCGCCC-

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCCCACCTA-----
GCCCCGCCCCCTCCC

MA0103.2_ZEB1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTCCCACCTA
-CCTCACCTG

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCACCTA----
ANNTNCCCACCCANNAC