Information for motif7


Reverse Opposite:

p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.601
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets440.0 +/- 412.5bp
Average Position of motif in Background575.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTATTCGGATC-
-GTAATCDGATTA

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGTATTCGGATC
TTCNAAGTACTTNNNNN

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGTATTCGGATC---
AANNATCCGGATGTNN

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTATTCGGATC
CTAATATTGCTAAA

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGTATTCGGATC-
---ATTTGCATAA

MA0124.1_NKX3-1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGTATTCGGATC
TAAGTAT-------

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGTATTCGGATC
TTTTAAGTACTTAAATT

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AGTATTCGGATC
TACTAAGTACTTAAATG

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AGTATTCGGATC
GGTAAGTA--------

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGTATTCGGATC-
---ATTTGCATAT