Information for motif11


Reverse Opposite:

p-value:1e-2
log p-value:-5.976e+00
Information Content per bp:1.509
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif2.71%
Number of Background Sequences with motif163.3
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets428.2 +/- 384.4bp
Average Position of motif in Background551.9 +/- 472.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGGGCATGGTGG-
NNAGGGGCGGGGTNNA

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGGGCATGGTGG-----
--RGSMTBCTGGGAAAT

MA0088.1_znf143/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCATGGTGG------
GCAAGGCATGATGGGAAATC

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGGCATGGTGG-
-GGGAATTGTAGT

MA0597.1_THAP1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCATGGTGG
TNNGGGCAG-----

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGGCATGGTGG-------
--NNANTGGTGGTCTTNNN

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CGGGCATGGTGG--
--------GTGGAT

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGGGCATGGTGG
--GGCGCGCT--

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGCATGGTGG
ATGCCCGGGCATGT---

MA0112.2_ESR1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGGCATGGTGG--------
AGGTCAGGGTGACCTGGNNN