Information for motif13


Reverse Opposite:

p-value:1e-2
log p-value:-4.733e+00
Information Content per bp:1.689
Number of Target Sequences with motif140.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif200.3
Percentage of Background Sequences with motif2.55%
Average Position of motif in Targets450.2 +/- 413.5bp
Average Position of motif in Background505.2 +/- 419.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGTAGTCCCAG
AGATGCAATCCC--

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGTAGTCCCAG
GCTGTG-------

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGTAGTCCCAG-
---HTTTCCCASG

MA0111.1_Spz1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAGTCCCAG
GCTGTTACCCT--

CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGTAGTCCCAG---------
-TGCAGTTCCNNNNNTGGCCA

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTGTAGTCCCAG------
---ATTTCCCAGVAKSCY

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------CTGTAGTCCCAG
AATCGCACTGCATTCCG--

MA0524.1_TFAP2C/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGTAGTCCCAG----
-CATGGCCCCAGGGCA

MA0154.2_EBF1/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTGTAGTCCCAG-----
------TCCCTGGGGAN

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAGTCCCAG----
NSTGTTTRCWCAGBNNN