Information for motif15


Reverse Opposite:

p-value:1e-1
log p-value:-3.647e+00
Information Content per bp:1.649
Number of Target Sequences with motif369.0
Percentage of Target Sequences with motif8.25%
Number of Background Sequences with motif587.4
Percentage of Background Sequences with motif7.47%
Average Position of motif in Targets413.8 +/- 379.2bp
Average Position of motif in Background519.6 +/- 429.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ATAGATGACA
---CATGAC-

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATAGATGACA-------
ATAAATGACACCTATCA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATAGATGACA
--AGATAASR

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ATAGATGACA-------
TTTTTAGAGATAAGAAATAAAG

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATAGATGACA--
GGTGYTGACAGS

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATAGATGACA
ATGATKGATGRC-

MA0037.2_GATA3/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATAGATGACA
--AGATAAGA

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATAGATGACA----
TATAGAGATAAGAATTG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATAGATGACA
--AGGTGTCA

MA0498.1_Meis1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATAGATGACA---
NNNTGAGTGACAGCT