Information for motif17


Reverse Opposite:

p-value:1e-1
log p-value:-3.393e+00
Information Content per bp:1.872
Number of Target Sequences with motif444.0
Percentage of Target Sequences with motif9.93%
Number of Background Sequences with motif718.0
Percentage of Background Sequences with motif9.13%
Average Position of motif in Targets485.2 +/- 458.6bp
Average Position of motif in Background538.7 +/- 442.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCTMTAGR---
TCACCTCTGGGCAG

MA0139.1_CTCF/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTMTAGR--------
TGGCCACCAGGGGGCGCTA

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTMTAGR-----------
GCCASCAGGGGGCGCYVNNG

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CCTMTAGR----
NTCNTCCCCTATNNGNN

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTMTAGR---------
TGGCCACCAGGTGGCACTNT

MA0057.1_MZF1_5-13/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTMTAGR
TTCCCCCTAC-

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.54
Offset:-10
Orientation:forward strand
Alignment:----------CCTMTAGR--
TTTTTTTTTTTTTTCAGGTT

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTMTAGR--------
CTACTAGGATGTNNTN

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.53
Offset:-10
Orientation:forward strand
Alignment:----------CCTMTAGR--
TTTTTTTTTTTTTTCAGGTT

MA0081.1_SPIB/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCTMTAGR
TTCCTCT---