Information for motif18


Reverse Opposite:

p-value:1e-1
log p-value:-3.345e+00
Information Content per bp:1.929
Number of Target Sequences with motif344.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif549.9
Percentage of Background Sequences with motif7.00%
Average Position of motif in Targets419.4 +/- 403.3bp
Average Position of motif in Background554.1 +/- 470.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GGGAGGCTGAGG-
-----GCTGACGC

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGAGGCTGAGG-
-ACAGGATGTGGT

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGGAGGCTGAGG----
--CAGGCCNNGGCCNN

POL002.1_INR/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGGAGGCTGAGG
--NNNANTGA--

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGAGGCTGAGG--
--NTGGGTGTGGCC

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGGAGGCTGAGG
----NGCTN---

MA0528.1_ZNF263/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGCTGAGG-------
GGAGGAGGAGGGGGAGGAGGA

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGGAGGCTGAGG--
---TGGGTGTGGCN

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGAGGCTGAGG
--TWGTCTGV--

MA0467.1_Crx/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGAGGCTGAGG
AAGAGGATTAG-