Information for motif19


Reverse Opposite:

p-value:1e-1
log p-value:-3.233e+00
Information Content per bp:1.588
Number of Target Sequences with motif262.0
Percentage of Target Sequences with motif5.86%
Number of Background Sequences with motif413.9
Percentage of Background Sequences with motif5.27%
Average Position of motif in Targets409.1 +/- 352.4bp
Average Position of motif in Background509.2 +/- 463.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0490.1_JUNB/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGACTGAGTCTC--
---ATGAGTCATCN

MA0478.1_FOSL2/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGACTGAGTCTC--
---NTGAGTCATCN

MA0477.1_FOSL1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGACTGAGTCTC-
--NATGAGTCACC

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGACTGAGTCTC
--GATGAGTCAT

MA0099.2_JUN::FOS/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGACTGAGTCTC
----TGAGTCA-

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGACTGAGTCTC-
-NNATGAGTCATN

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGACTGAGTCTC-
-NDATGASTCATH

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGACTGAGTCTC-----
---ATGAGTCATNTNNT

POL002.1_INR/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGACTGAGTCTC
NNNANTGA-----

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGACTGAGTCTC
-TGCTGAGTCA-