Information for motif23


Reverse Opposite:

p-value:1e0
log p-value:-1.943e+00
Information Content per bp:1.763
Number of Target Sequences with motif212.0
Percentage of Target Sequences with motif4.74%
Number of Background Sequences with motif346.2
Percentage of Background Sequences with motif4.40%
Average Position of motif in Targets441.0 +/- 410.9bp
Average Position of motif in Background494.3 +/- 484.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CTCYTTTTTTTT-----
NNNNTTTTTTTTTNAAC

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CTCYTTTTTTTT---
NTNTTGTTGTTTGTN

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:CTCYTTTTTTTT------
----TTTTTTTTCNNGTN

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTCYTTTTTTTT----
GNATTTTTTTTTTGANC

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTCYTTTTTTTT-----
--NNTTTNTTTTNGNNN

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCYTTTTTTTT---
NNNTCCTTTGTTCTNNN

MA0514.1_Sox3/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTCYTTTTTTTT
--CCTTTGTTTT

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTCYTTTTTTTT----
--NNTTTTTCTTATNT

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCYTTTTTTTT---
TNNTCCTTTGTTCTNNT

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCYTTTTTTTT-----
-NNTTTTGTTTTGATNT