Information for motif24


Reverse Opposite:

p-value:1e0
log p-value:-1.278e+00
Information Content per bp:1.533
Number of Target Sequences with motif160.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif268.6
Percentage of Background Sequences with motif3.42%
Average Position of motif in Targets845.5 +/- 538.8bp
Average Position of motif in Background796.7 +/- 353.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCGCCCGCCG
-AGCGCGCC-

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCGCCG
NCANGCGCGCGCGCCA

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCGCCCGCCG
GGTCCCGCCC

MA0469.1_E2F3/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCGCCCGCCG------
-CTCCCGCCCCCACTC

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCGCCG
NNNGGGGCGCCCCCNN

MA0470.1_E2F4/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCCGCCG
NNTTCCCGCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCGCCCGCCG
-CCCCCCCC-

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCCGCCG----
ANCGCGCGCCCTTNN

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGCCCGCCG-----
TACGCCCCGCCACTCTG

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCGCCG-
TCCGCCCCCGCATT