Information for motif25


Reverse Opposite:

p-value:1e0
log p-value:-1.112e+00
Information Content per bp:1.590
Number of Target Sequences with motif201.0
Percentage of Target Sequences with motif4.49%
Number of Background Sequences with motif342.2
Percentage of Background Sequences with motif4.35%
Average Position of motif in Targets651.9 +/- 529.7bp
Average Position of motif in Background679.1 +/- 463.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCGATCCG
--GCTCCG

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCGATCCG-----
NNNNTGACCCGGCGCG

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGATCCG
NTATYGATCH-

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGATCCG-------
GTACATCCGGATTTTT

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGATCCG--
NRYTTCCGGH

MA0461.1_Atoh1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCGATCCG
GCCATCTG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGATCCG--
GCCATCTGTT

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCGATCCG--
NRYTTCCGGY

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCGATCCG---
-ACATCCTGNT

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCGATCCG---
ACTATGCCAACCTACC