Information for motif26


Reverse Opposite:

p-value:1e0
log p-value:-7.466e-01
Information Content per bp:1.530
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif139.2
Percentage of Background Sequences with motif1.77%
Average Position of motif in Targets737.5 +/- 549.2bp
Average Position of motif in Background789.8 +/- 405.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGCCG----
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCCG-----
CCTTCGGCGCCAAAAGG

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGGCGCCG-
-GGCGCGCT

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGGCGCCG
--GCTCCG

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCCG----
TTGGGGGCGCCCCTAG

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGCGCCG-----
-GGCCCCGCCCCC

PB0131.1_Gmeb1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGCCG----
TNAACGACGTCGNCCA

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGCCG-
NNGCNCTGCGCGGC

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------CGGCGCCG
NNTTTANNCGACGNA-

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGCCG--
ANTGCGGGGGCGGN