Information for motif3


Reverse Opposite:

p-value:1e-7
log p-value:-1.736e+01
Information Content per bp:1.705
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif106.5
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets399.1 +/- 420.2bp
Average Position of motif in Background543.7 +/- 438.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CACAGGTGTGAG
--CAGGTGAGG-

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CACAGGTGTGAG-
---AGGTGTGAAM

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CACAGGTGTGAG
---AGGTGTCA-

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CACAGGTGTGAG--
ATCCACAGGTGCGAAAA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACAGGTGTGAG
NNCAGGTGNN--

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CACAGGTGTGAG----
GAAAAGGTGTGAAAATT

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CACAGGTGTGAG
GAAGAACAGGTGTCCG

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACAGGTGTGAG
NAACAGCTGT---

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAGGTGTGAG
-GCAGCTGTNN-

MA0009.1_T/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CACAGGTGTGAG
-CTAGGTGTGAA