Information for motif5


Reverse Opposite:

p-value:1e-5
log p-value:-1.263e+01
Information Content per bp:1.910
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets519.4 +/- 508.8bp
Average Position of motif in Background524.0 +/- 423.8bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)2.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0023.1_Dlx4/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATCTCTGTAATT------
-GCGCTATAATTACCGAC

MA0075.1_Prrx2/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:ATCTCTGTAATT
-------TAATT

MA0158.1_HOXA5/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ATCTCTGTAATT
----CACTAATT

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATCTCTGTAATT-----
-TATTGGTAATTACCTT

PH0022.1_Dlx3/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCTCTGTAATT-------
--NNNGGTAATTATNGNGN

MA0038.1_Gfi1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATCTCTGTAATT--
----CNGTGATTTN

MA0125.1_Nobox/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ATCTCTGTAATT---
-------TAATTGGT

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCTCTGTAATT---
AGGACGCTGTAAAGGGA

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATCTCTGTAATT---
NCNTTTGTTATTTNN

MA0483.1_Gfi1b/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATCTCTGTAATT-
--TGCTGTGATTT