p-value: | 1e-3 |
log p-value: | -8.486e+00 |
Information Content per bp: | 1.728 |
Number of Target Sequences with motif | 140.0 |
Percentage of Target Sequences with motif | 3.13% |
Number of Background Sequences with motif | 181.0 |
Percentage of Background Sequences with motif | 2.30% |
Average Position of motif in Targets | 373.1 +/- 406.1bp |
Average Position of motif in Background | 573.5 +/- 465.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGCAAGACTSWD --CCAGACAG-- |
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Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGCAAGACTSWD AGGTGHCAGACA--- |
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MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGCAAGACTSWD AGGTGNCAGACAG-- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGCAAGACTSWD --BCAGACWA-- |
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MA0092.1_Hand1::Tcfe2a/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGCAAGACTSWD ATGCCAGACN--- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGCAAGACTSWD --CCAGACRSVB |
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MA0598.1_EHF/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGCAAGACTSWD CAGGAAGG----- |
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PB0037.1_Isgf3g_1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGCAAGACTSWD CAAAATCGAAACTAA- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGCAAGACTSWD-- CAAATCCAGACATCACA |
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PB0035.1_Irf5_1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGCAAGACTSWD ATAAACCGAAACCAA- |
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