Information for motif1


Reverse Opposite:

p-value:1e-13
log p-value:-3.209e+01
Information Content per bp:1.731
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets208.6 +/- 189.8bp
Average Position of motif in Background359.5 +/- 223.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TACAGAACCGAA--
--CGGAAGTGAAAC

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TACAGAACCGAA---
---AGAAACGAAAGT

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TACAGAACCGAA----
--GAGAACCGAAACTG

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TACAGAACCGAA-
-----AACCGANA

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TACAGAACCGAA
GGTTAGAGACCT---

MA0025.1_NFIL3/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TACAGAACCGAA
ANGTTACATAA-----

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TACAGAACCGAA
TACTNNNN----

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TACAGAACCGAA-
NNGATCTAGAACCTNNN

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TACAGAACCGAA
CACAGN------

PB0162.1_Sfpi1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TACAGAACCGAA
CAAATTCCGGAACC---