Information for motif11


Reverse Opposite:

p-value:1e-6
log p-value:-1.451e+01
Information Content per bp:1.703
Number of Target Sequences with motif551.0
Percentage of Target Sequences with motif10.18%
Number of Background Sequences with motif1947.3
Percentage of Background Sequences with motif8.28%
Average Position of motif in Targets525.7 +/- 494.6bp
Average Position of motif in Background534.9 +/- 430.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCACCGCGCCC----
TCGACCCCGCCCCTAT

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCCACCGCGCCC
---AGCGCGCC-

MA0039.2_Klf4/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCCACCGCGCCC-
---GCCCCACCCA

MA0162.2_EGR1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCACCGCGCCC---
-CCCCCGCCCCCGCC

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCACCGCGCCC-
---GCCCCGCCCC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCCACCGCGCCC-
---GCCMCRCCCH

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCACCGCGCCC
GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCCACCGCGCCC---
-NAGCCCCGCCCCCN

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCACCGCGCCC-----
GGTCCCGCCCCCTTCTC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCACCGCGCCC
----CCCCCCCC