p-value: | 1e-5 |
log p-value: | -1.156e+01 |
Information Content per bp: | 1.698 |
Number of Target Sequences with motif | 453.0 |
Percentage of Target Sequences with motif | 8.37% |
Number of Background Sequences with motif | 1610.8 |
Percentage of Background Sequences with motif | 6.85% |
Average Position of motif in Targets | 419.3 +/- 402.2bp |
Average Position of motif in Background | 448.8 +/- 413.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.0 |
Multiplicity (# of sites on avg that occur together) | 1.08 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCAGGCTGGTCA -TWGTCTGV--- |
|

|
|
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCAGGCTGGTCA CGTGGGTGGTCC |
|

|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCAGGCTGGTCA CCAGACAG---- |
|

|
|
PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCAGGCTGGTCA---- CGCGCCGGGTCACGTA |
|

|
|
SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCAGGCTGGTCA -AAGGCAAGTGT |
|

|
|
PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCAGGCTGGTCA CAAATCCAGACATCACA |
|

|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CCAGGCTGGTCA ------AGGTCA |
|

|
|
POL010.1_DCE_S_III/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCAGGCTGGTCA ---NGCTN---- |
|

|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCAGGCTGGTCA CCAGACRSVB-- |
|

|
|
PB0196.1_Zbtb7b_2/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCAGGCTGGTCA---- NNANTGGTGGTCTTNNN |
|

|
|