Information for motif15


Reverse Opposite:

p-value:1e-3
log p-value:-9.012e+00
Information Content per bp:1.510
Number of Target Sequences with motif640.0
Percentage of Target Sequences with motif11.83%
Number of Background Sequences with motif2416.0
Percentage of Background Sequences with motif10.28%
Average Position of motif in Targets418.3 +/- 415.7bp
Average Position of motif in Background476.1 +/- 430.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCTGAGGCRGA
ATTGCCTGAGGCAAT

MA0516.1_SP2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGAGGCRGA--
GGGNGGGGGCGGGGC

MA0039.2_Klf4/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCTGAGGCRGA
TGGGTGGGGC---

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGAGGCRGA
TGGGTGTGGC---

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGAGGCRGA
GGGGNGGGGC---

MA0162.2_EGR1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTGAGGCRGA--
GGCGGGGGCGGGGG

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCTGAGGCRGA
DGGGYGKGGC---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCTGAGGCRGA
NTGGGTGTGGCC--

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCTGAGGCRGA
TWGTCTGV------

MA0493.1_Klf1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGAGGCRGA
TGGGTGTGGCN--