Information for motif17


Reverse Opposite:

p-value:1e-3
log p-value:-8.307e+00
Information Content per bp:1.972
Number of Target Sequences with motif216.0
Percentage of Target Sequences with motif3.99%
Number of Background Sequences with motif735.4
Percentage of Background Sequences with motif3.13%
Average Position of motif in Targets377.2 +/- 396.1bp
Average Position of motif in Background453.7 +/- 427.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGAGGCT-
ATTTTNGGGGGGCNN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGAGGCT
CTTGAGTGGCT

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGGGAGGCT----
GTATTGGGTGGGTAATT

PB0201.1_Zfp281_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGAGGCT---
NNNATTGGGGGTNTCCT

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTGGGAGGCT
TTGGCA----

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TTGGGAGGCT-
------NGCTN

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTGGGAGGCT----
NTNNNAGGAGTCTCNTN

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTGGGAGGCT
NGCGTGGGCGGR-

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGAGGCT
CTTGGCAA---

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGAGGCT--
NNTNAGGGGCGGNNNN