Information for motif21


Reverse Opposite:

p-value:1e-2
log p-value:-6.370e+00
Information Content per bp:1.912
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.06%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets237.3 +/- 103.0bp
Average Position of motif in Background714.8 +/- 245.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0442.1_SOX10/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACAGAGCGGTGC
ACAAAG------

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACAGAGCGGTGC
-CACAGN-----

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ACAGAGCGGTGC
---CAGCC----

MA0514.1_Sox3/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---ACAGAGCGGTGC
AAAACAAAGG-----

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------ACAGAGCGGTGC
AGAAGAACAAAGGACTA-

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:forward strand
Alignment:ACAGAGCGGTGC--
GGAGAAAGGTGCGA

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------ACAGAGCGGTGC
AAACAGACAAAGGAAT--

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAGCGGTGC----
NNNANTGCAGTGCNNTT

POL001.1_MTE/Jaspar

Match Rank:9
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------ACAGAGCGGTGC-
TTTCGAGCGGAACGGTCGC

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--ACAGAGCGGTGC---
NNNNTGAGCACTGTNNG