Information for motif26


Reverse Opposite:

p-value:1e-2
log p-value:-5.375e+00
Information Content per bp:1.681
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif338.8
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets326.3 +/- 321.7bp
Average Position of motif in Background482.1 +/- 463.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGCTACTTGGGA-
ACATGCTACCTAATAC

PH0089.1_Isx/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGCTACTTGGGA--
ACNNCTAATTAGNNNN

PH0098.1_Lhx8/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGCTACTTGGGA--
CACCGCTAATTAGNNGN

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCTACTTGGGA-
ACTTGCTACCTACACC

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGCTACTTGGGA
---TACTNNNN-

PH0094.1_Lhx4/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGCTACTTGGGA--
CAAAGCTAATTAGNTTN

MA0124.1_NKX3-1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGCTACTTGGGA
--ATACTTA---

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCTACTTGGGA---
ATAACCACTTGAAAATT

PH0034.1_Gbx2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCTACTTGGGA---
AGCGCTAATTAGCGATT

PH0032.1_Evx2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCTACTTGGGA--
CACCGCTAATTAGCGGT