Information for motif32


Reverse Opposite:

p-value:1e0
log p-value:-1.161e+00
Information Content per bp:1.615
Number of Target Sequences with motif309.0
Percentage of Target Sequences with motif5.71%
Number of Background Sequences with motif1305.6
Percentage of Background Sequences with motif5.55%
Average Position of motif in Targets783.3 +/- 557.1bp
Average Position of motif in Background766.1 +/- 434.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCGGCGCG--
--GGCGCGCT

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCGGCGCG------
AGCTCGGCGCCAAAAGC

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCGGCGCG------
CCTTCGGCGCCAAAAGG

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGCGCG
NNTTTANNCGACGNA

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCGGCGCG
GGGGGCGGGGCC

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGCGCG--
NAGANTGGCGGGGNGNA

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGGCGCG----
ATAAGGGCGCGCGAT

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------GCGGCGCG
GGGNGGGGGCGGGGC-

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCGCG-----
NNNGGGGCGCCCCCNN

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGGCGCG
-CGGAGC-