| p-value: | 1e-10 |
| log p-value: | -2.485e+01 |
| Information Content per bp: | 1.718 |
| Number of Target Sequences with motif | 714.0 |
| Percentage of Target Sequences with motif | 13.20% |
| Number of Background Sequences with motif | 2430.1 |
| Percentage of Background Sequences with motif | 10.34% |
| Average Position of motif in Targets | 404.7 +/- 397.1bp |
| Average Position of motif in Background | 459.5 +/- 435.5bp |
| Strand Bias (log2 ratio + to - strand density) | 0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.34 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 1 |
| Score: | 0.66
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | TGTAATCCCAGC
--TAATCCCN-- |
|
|
|
PB0185.1_Tcf1_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.63
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TGTAATCCCAGC--
NNTAATCCNGNCNN |
|
|
|
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 3 |
| Score: | 0.61
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TGTAATCCCAGC
GCTAATCC---- |
|
|
|
PH0137.1_Pitx1/Jaspar
| Match Rank: | 4 |
| Score: | 0.60
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TGTAATCCCAGC--
NTTGTTAATCCCTCTNN |
|
|
|
PH0124.1_Obox5_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TGTAATCCCAGC-
NANANTTAATCCCNNNN |
|
|
|
PH0129.1_Otx1/Jaspar
| Match Rank: | 6 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TGTAATCCCAGC-
NNNAATTAATCCCCNCN |
|
|
|
PH0125.1_Obox5_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TGTAATCCCAGC-
GATAATTAATCCCTCTT |
|
|
|
PH0138.1_Pitx2/Jaspar
| Match Rank: | 8 |
| Score: | 0.56
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TGTAATCCCAGC-
GNNNATTAATCCCTNCN |
|
|
|
MA0019.1_Ddit3::Cebpa/Jaspar
| Match Rank: | 9 |
| Score: | 0.56
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---TGTAATCCCAGC
AGATGCAATCCC--- |
|
|
|
PH0139.1_Pitx3/Jaspar
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TGTAATCCCAGC
GNNAGCTAATCCCCCN |
|
|
|
