p-value: | 1e-10 |
log p-value: | -2.485e+01 |
Information Content per bp: | 1.718 |
Number of Target Sequences with motif | 714.0 |
Percentage of Target Sequences with motif | 13.20% |
Number of Background Sequences with motif | 2430.1 |
Percentage of Background Sequences with motif | 10.34% |
Average Position of motif in Targets | 404.7 +/- 397.1bp |
Average Position of motif in Background | 459.5 +/- 435.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.34 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGTAATCCCAGC --TAATCCCN-- |
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PB0185.1_Tcf1_2/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTAATCCCAGC-- NNTAATCCNGNCNN |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTAATCCCAGC GCTAATCC---- |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGTAATCCCAGC-- NTTGTTAATCCCTCTNN |
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PH0124.1_Obox5_1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGTAATCCCAGC- NANANTTAATCCCNNNN |
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PH0129.1_Otx1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGTAATCCCAGC- NNNAATTAATCCCCNCN |
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PH0125.1_Obox5_2/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGTAATCCCAGC- GATAATTAATCCCTCTT |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGTAATCCCAGC- GNNNATTAATCCCTNCN |
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MA0019.1_Ddit3::Cebpa/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGTAATCCCAGC AGATGCAATCCC--- |
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PH0139.1_Pitx3/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGTAATCCCAGC GNNAGCTAATCCCCCN |
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