Information for motif5


Reverse Opposite:

p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.623
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets356.6 +/- 323.4bp
Average Position of motif in Background440.6 +/- 211.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTATGKTGYTGT---
NNNTGTTGTTGTTNG

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGKTGYTGT
NCGTATTATAATCNTA-

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TTATGKTGYTGT
TATAATTATAATATTC-

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTATGKTGYTGT-----
--GTNTTGTTGTGANNT

MA0041.1_Foxd3/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTATGKTGYTGT
GAATGTTTGTTT

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTATGKTGYTGT
-TATGTNTA---

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTATGKTGYTGT-----
-NNTTTTGTTTTGATNT

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGKTGYTGT
NNTAATTATAATNANN-

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------TTATGKTGYTGT
NNCTTTGTTTTGNTNNN--

MA0029.1_Mecom/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TTATGKTGYTGT
TNTTATCTTATCTT