p-value: | 1e-8 |
log p-value: | -1.909e+01 |
Information Content per bp: | 1.850 |
Number of Target Sequences with motif | 830.0 |
Percentage of Target Sequences with motif | 15.34% |
Number of Background Sequences with motif | 2978.2 |
Percentage of Background Sequences with motif | 12.67% |
Average Position of motif in Targets | 394.6 +/- 398.6bp |
Average Position of motif in Background | 453.4 +/- 431.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.40 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCAGYAATCC-- ----TAATCCCN |
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PH0126.1_Obox6/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCAGYAATCC------ -CNATAATCCGNTTNT |
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PH0025.1_Dmbx1/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCAGYAATCC------ NNNATTAATCCGNTTNA |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAGYAATCC----- GNNNATTAATCCCTNCN |
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MA0158.1_HOXA5/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCAGYAATCC -CACTAATT- |
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PH0130.1_Otx2/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAGYAATCC----- GANNATTAATCCCTNNN |
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PH0035.1_Gsc/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCAGYAATCC----- AATCGTTAATCCCTTTA |
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PB0185.1_Tcf1_2/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCAGYAATCC------ --NNTAATCCNGNCNN |
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PH0129.1_Otx1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAGYAATCC----- NNNAATTAATCCCCNCN |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCAGYAATCC --GCTAATCC |
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