Information for motif7


Reverse Opposite:

p-value:1e-7
log p-value:-1.707e+01
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif64.3
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets346.4 +/- 341.0bp
Average Position of motif in Background550.5 +/- 489.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0116.1_Elf3_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAT----
GTTCAAAAAAAAAATTC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAT-
TACTGGAAAAAAAA

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAT---
AACCCAATAAAATTCG

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAT---
CTACCAATAAAATTCT

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAAAAT
NCYAATAAAA-

MA0052.2_MEF2A/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTAAAAAAAT---
AGCTAAAAATAGCAT

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAT----
GTTAAAAAAAAAAATTA

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAT----
AATGCAATAAAATTTAT

MA0497.1_MEF2C/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAT--
ATGCTAAAAATAGAA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAAAAT-
DCYAAAAATAGM