Information for motif8


Reverse Opposite:

p-value:1e-6
log p-value:-1.523e+01
Information Content per bp:1.962
Number of Target Sequences with motif182.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif533.1
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets364.2 +/- 368.5bp
Average Position of motif in Background385.6 +/- 412.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0069.1_Pax6/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCATGCCTGTAA
AANTCATGCGTGAA-

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCATGCCTGTAA
NNACTTGCCTT---

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCATGCCTGTAA
GTCATN-------

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCATGCCTGTAA-
---TTCCNGGAAG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCATGCCTGTAA
RCATTCCWGG--

MA0067.1_Pax2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCATGCCTGTAA
AGTCACGC------

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCATGCCTGTAA
CNAGGCCT----

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCATGCCTGTAA---
-NCTTCCNGGAAGNN

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TCATGCCTGTAA
NNGGCCACGCCTTTN-

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TCATGCCTGTAA
-----GCTGTG-