Information for motif11


Reverse Opposite:

p-value:1e0
log p-value:-1.558e+00
Information Content per bp:1.836
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets355.8 +/- 489.2bp
Average Position of motif in Background522.4 +/- 358.3bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTCGAG--
TTTTTTTTCNNGTN

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTCGAG----
ANATTTTACGAGNNNN

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTCGAG----
NAATTTTACGAGNTNN

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TTTTTTCGAG-
GNATTTTTTTTTTGANC

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TTTTTTCGAG-
NNNNTTTTTTTTTNAAC

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTCGAG----
ANNATTTTACGACNTNA

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTCGAG----
GNNNTTTTACGACCTNA

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTCGAG----
NNNATTTTACGACNNTN

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTTCGAG-
NNTTTNTTTTNGNNN

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTCGAG----
NNGTTTTACGACTTTA