Information for motif13


Reverse Opposite:

p-value:1e0
log p-value:-9.139e-01
Information Content per bp:1.942
Number of Target Sequences with motif323.0
Percentage of Target Sequences with motif5.98%
Number of Background Sequences with motif474.9
Percentage of Background Sequences with motif5.90%
Average Position of motif in Targets366.1 +/- 393.9bp
Average Position of motif in Background518.1 +/- 509.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTACTC
CACAGCTGCAG

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCAGCTACTC
NCAGCTGCTG

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTACTC-----
ACATGCTACCTAATAC

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCAGCTACTC---
CTCAGCAGCTGCTACTG

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTACTC-----
ACTTGCTACCTACACC

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTACTC-
AGCAGCTGCTNN

MA0500.1_Myog/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTACTC
NNGCAGCTGTC-

MA0521.1_Tcf12/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTACTC
NNGCAGCTGTT-

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCAGCTACTC
-CAGCTGTT-

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTACTC--
TGCAGCTGTCCCT