Information for motif15


Reverse Opposite:

p-value:1e0
log p-value:-5.623e-01
Information Content per bp:1.735
Number of Target Sequences with motif186.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif280.4
Percentage of Background Sequences with motif3.48%
Average Position of motif in Targets365.4 +/- 383.5bp
Average Position of motif in Background536.3 +/- 512.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0471.1_E2F6/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGCAGGAGAAT
GGGCGGGAAGG-

MA0470.1_E2F4/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGCAGGAGAAT
GGGCGGGAAGG-

MA0469.1_E2F3/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AGGCAGGAGAAT
NNGTGNGGGCGGGAG---

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGCAGGAGAAT
-GGCGGGAARN-

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGCAGGAGAAT
TGGCGGGAAAHB

MA0024.2_E2F1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGCAGGAGAAT
CGGGCGGGAGG--

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGCAGGAGAAT
-GGCGGGAAAH-

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGGCAGGAGAAT
-NNCAGGTGNN-

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGCAGGAGAAT
CACAGCAGGGGG--

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGGCAGGAGAAT
CCACACAGCAGGAGA--