Information for motif16


Reverse Opposite:

p-value:1e0
log p-value:-4.762e-01
Information Content per bp:1.965
Number of Target Sequences with motif302.0
Percentage of Target Sequences with motif5.59%
Number of Background Sequences with motif457.8
Percentage of Background Sequences with motif5.69%
Average Position of motif in Targets420.1 +/- 423.4bp
Average Position of motif in Background510.4 +/- 496.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0114.2_HNF4A/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCAGCACTTTG-----
--CTGGACTTTGGACTC

MA0484.1_HNF4G/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCAGCACTTTG------
---TGGACTTTGNNCTCN

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCAGCACTTTG
--AAGCACTTAA

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCCAGCACTTTG-------
---TGGACTTTGNNCTNTG

MA0496.1_MAFK/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCCAGCACTTTG
CTGAGTCAGCAATTT-

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCCAGCACTTTG
HWWGTCAGCAWWTTT

MA0495.1_MAFF/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCCAGCACTTTG-
GCTGAGTCAGCAATTTTT

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGCACTTTG-
AAGTCAGCANTTTTN

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCCAGCACTTTG
ATGACTCAGCANWWT-

MA0501.1_NFE2::MAF/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCCAGCACTTTG
ATGACTCAGCAATTT-