Information for motif20


Reverse Opposite:

p-value:1e0
log p-value:-3.000e-05
Information Content per bp:1.658
Number of Target Sequences with motif698.0
Percentage of Target Sequences with motif12.91%
Number of Background Sequences with motif1193.0
Percentage of Background Sequences with motif14.82%
Average Position of motif in Targets367.2 +/- 314.7bp
Average Position of motif in Background543.1 +/- 443.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAAAA---
GTTAAAAAAAAAAATTA

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAAAA
AACAAACAACAAGAG

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAAAA
TACTGGAAAAAAAA---

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAAAA-
GTTCAAAAAAAAAATTC

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAA--
AAATAAGAAAAAAC

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAAAA
AGCCGAAAAAAAAAT-

MA0041.1_Foxd3/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAAAA
AAACAAACATTC

MA0481.1_FOXP1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAAAA
CAAAAGTAAACAAAG

MA0042.1_FOXI1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAAAA
AAACAAACANNC

MA0497.1_MEF2C/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAAAA
ATGCTAAAAATAGAA--