Information for motif10


Reverse Opposite:

p-value:1e-5
log p-value:-1.292e+01
Information Content per bp:1.829
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif8.94%
Average Position of motif in Targets137.5 +/- 142.0bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCYAAAT--
CCAAAAATAG

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCYAAAT
AGGTCTCTAACC

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCYAAAT
AGCCACTCAAG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCYAAAT
AASCACTCAA-

MA0052.2_MEF2A/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCYAAAT-----
AGCTAAAAATAGCAT

MA0485.1_Hoxc9/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCYAAAT---
GGCCATAAATCAC

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCYAAAT---
DCYAAAAATAGM

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCYAAAT--
GNCTATAAAAGG

CHR/Cell-Cycle-Exp/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTCYAAAT
CGGTTTCAAA-

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCYAAAT-------
GTATAAAAGGCGGGG