Information for motif11


Reverse Opposite:

p-value:1e-5
log p-value:-1.292e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif15.76%
Average Position of motif in Targets187.1 +/- 103.6bp
Average Position of motif in Background150.8 +/- 83.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.73
Offset:-7
Orientation:forward strand
Alignment:-------AGAACTCT
TATCATTAGAACGCT

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------AGAACTCT--
NNGATCTAGAACCTNNN

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGAACTCT---
ACTCCAAGTACTTGGAA

MA0512.1_Rxra/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGAACTCT-
NCTGACCTTTG

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAACTCT-------
NNAATTCTCGNTNAN

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAACTCT-
AAGCACTTAA

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGAACTCT---
NNNNTGAGCACTGTNNG

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGAACTCT----
GACAGAGATATCAGTGT

PH0116.1_Nkx2-9/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AGAACTCT---
NATTTAAGTACTTNAAA

MA0114.2_HNF4A/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGAACTCT------
CTGGACTTTGGACTC