Information for motif13


Reverse Opposite:

p-value:1e-4
log p-value:-1.078e+01
Information Content per bp:1.798
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif8.94%
Average Position of motif in Targets234.7 +/- 161.9bp
Average Position of motif in Background423.0 +/- 287.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0042.1_FOXI1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGTTTCTT-
GGATGTTTGTTT

MA0041.1_Foxd3/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGTTTCTT-
GAATGTTTGTTT

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTCTT----
NNTTTTTCTTATNT

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGTTTCTT-
TGTTTATTT

MA0040.1_Foxq1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TGTTTCTT
TATTGTTTATT

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TGTTTCTT---
NTNTTGTTGTTTGTN

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGTTTCTT
CAGCTGTTTCCT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTTTCTT------
TTTTTTTTCNNGTN

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGTTTCTT-----
NNNNTTTTTTTTTNAAC

MA0593.1_FOXP2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTCTT-
TNTGTTTACTT